Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.43□□□□□ -0.58
Cdh17Q9R100 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdh17Q9R100 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm28937-201ENSMUST00000185413 695 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm29400-201ENSMUST00000187208 695 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm28662-201ENSMUST00000188446 695 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm28251-201ENSMUST00000188835 695 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm37318-201ENSMUST00000194325 695 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm38017-201ENSMUST00000194768 695 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm37287-201ENSMUST00000195449 695 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm37793-201ENSMUST00000195548 695 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm44651-201ENSMUST00000207343 372 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm2553-201ENSMUST00000215986 605 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm18065-201ENSMUST00000221395 526 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Rgr-203ENSMUST00000225070 4704 ntBASIC11.42□□□□□ -0.58
Cdh17Q9R100 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdh17Q9R100 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Erich3-203ENSMUST00000189969 3460 ntBASIC11.41□□□□□ -0.58
Cdh17Q9R100 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.41□□□□□ -0.58
Cdh17Q9R100 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.41□□□□□ -0.58
Cdh17Q9R100 AA914427-201ENSMUST00000193194 1166 ntBASIC11.41□□□□□ -0.58
Cdh17Q9R100 Gm45224-201ENSMUST00000208203 414 ntBASIC11.41□□□□□ -0.58
Cdh17Q9R100 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.41□□□□□ -0.58
Cdh17Q9R100 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Gm807-202ENSMUST00000224929 408 ntBASIC11.41□□□□□ -0.58
Cdh17Q9R100 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.41□□□□□ -0.58
Cdh17Q9R100 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdh17Q9R100 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms