Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Svil-203ENSMUST00000126977 7907 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Gm13365-201ENSMUST00000121188 973 ntBASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Gm27622-201ENSMUST00000183779 60 ntBASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Gm27533-201ENSMUST00000183800 152 ntBASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Gm10253-201ENSMUST00000194270 940 ntBASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Smco4Q9JIS3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm22065-201ENSMUST00000103753 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm22066-201ENSMUST00000103761 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm24932-201ENSMUST00000103763 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm24115-201ENSMUST00000103799 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm22190-201ENSMUST00000103827 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm22191-201ENSMUST00000103831 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm24721-201ENSMUST00000103849 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm28018-201ENSMUST00000103869 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm26399-201ENSMUST00000103937 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm16202-201ENSMUST00000117532 544 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm6415-201ENSMUST00000118488 348 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm25349-201ENSMUST00000177728 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm23616-201ENSMUST00000177797 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm25871-201ENSMUST00000177816 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm24752-201ENSMUST00000178240 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm24496-201ENSMUST00000178287 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm25649-201ENSMUST00000178476 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm25548-201ENSMUST00000178681 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm23147-201ENSMUST00000178841 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm26095-201ENSMUST00000179270 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm22171-201ENSMUST00000179283 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm23936-201ENSMUST00000179354 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm22619-201ENSMUST00000179516 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm25255-201ENSMUST00000179579 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm24755-201ENSMUST00000179691 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm26506-201ENSMUST00000179692 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm25086-201ENSMUST00000179931 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm23243-201ENSMUST00000180047 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm24659-201ENSMUST00000180212 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm24169-201ENSMUST00000180244 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm23689-201ENSMUST00000180354 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm27359-201ENSMUST00000184153 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm27785-201ENSMUST00000184268 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm27466-201ENSMUST00000184396 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Gm27703-201ENSMUST00000184836 110 ntBASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Smco4Q9JIS3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms