Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm12419-201ENSMUST00000116649 636 ntBASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Gm15131-201ENSMUST00000119124 595 ntBASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Gm24514-201ENSMUST00000174961 285 ntBASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Gm43852-201ENSMUST00000202098 917 ntBASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Gm9132-201ENSMUST00000210182 832 ntBASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.99□□□□□ -0.17
Ube3bQ9ES34 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.99□□□□□ -0.17
Ube3bQ9ES34 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Gm10179-201ENSMUST00000086233 688 ntBASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ube3bQ9ES34 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Gm45657-201ENSMUST00000211318 1349 ntBASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Gm11500-201ENSMUST00000118237 601 ntBASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Gm19459-201ENSMUST00000176240 835 ntBASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Gm7467-201ENSMUST00000185173 652 ntBASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube3bQ9ES34 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Gm42535-201ENSMUST00000197312 1399 ntBASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Gm20495-201ENSMUST00000173902 235 ntBASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Gm3508-201ENSMUST00000186012 792 ntBASIC13.97□□□□□ -0.17
Ube3bQ9ES34 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Gm8574-201ENSMUST00000203207 924 ntBASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Gm5051-201ENSMUST00000204085 485 ntBASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube3bQ9ES34 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms