Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Gm12203-201ENSMUST00000118235 598 ntBASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Gm12209-201ENSMUST00000120089 596 ntBASIC11.27□□□□□ -0.61
Ube4bQ9ES00 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ube4bQ9ES00 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Gm14704-201ENSMUST00000120300 874 ntBASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Gm26185-201ENSMUST00000157692 266 ntBASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Gm8652-201ENSMUST00000181363 964 ntBASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Gm8099-201ENSMUST00000200510 742 ntBASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Gm807-202ENSMUST00000224929 408 ntBASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.26□□□□□ -0.61
Ube4bQ9ES00 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ube4bQ9ES00 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Spata33-207ENSMUST00000212760 4074 ntBASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.25□□□□□ -0.61
Ube4bQ9ES00 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ube4bQ9ES00 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms