Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tubb3Q9ERD7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Gm23912-201ENSMUST00000104687 87 ntBASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Gm18730-201ENSMUST00000218038 343 ntBASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Nsd1-205ENSMUST00000224693 852 ntBASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tubb3Q9ERD7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm5706-201ENSMUST00000181525 993 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm29615-201ENSMUST00000185371 697 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm28224-201ENSMUST00000186078 697 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm29001-201ENSMUST00000186177 697 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm28292-201ENSMUST00000186593 697 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm28101-201ENSMUST00000187608 697 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm29076-201ENSMUST00000187689 697 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm28302-201ENSMUST00000187931 697 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm28646-201ENSMUST00000188220 697 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm28205-201ENSMUST00000189177 697 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm29032-201ENSMUST00000189797 697 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm28695-201ENSMUST00000190300 697 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Gm37448-201ENSMUST00000192795 697 ntBASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tubb3Q9ERD7 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms