Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sf3a3Q9D554 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Gm42693-201ENSMUST00000196779 631 ntBASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Gm20949-201ENSMUST00000206478 952 ntBASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Gm10254-201ENSMUST00000052888 867 ntBASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.82□□□□□ -0.52
Sf3a3Q9D554 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sf3a3Q9D554 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Gm8018-201ENSMUST00000173536 789 ntBASIC11.81□□□□□ -0.52
Sf3a3Q9D554 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.81□□□□□ -0.52
Sf3a3Q9D554 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sf3a3Q9D554 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms