Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.11□□□□□ -0.63
Upk1aQ9D132 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk1aQ9D132 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.11□□□□□ -0.63
Upk1aQ9D132 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Upk1aQ9D132 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.1□□□□□ -0.63
Upk1aQ9D132 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.1□□□□□ -0.63
Upk1aQ9D132 Gm4986-201ENSMUST00000119731 549 ntBASIC11.1□□□□□ -0.63
Upk1aQ9D132 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Snora78-201ENSMUST00000158630 128 ntBASIC11.1□□□□□ -0.63
Upk1aQ9D132 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Gm5950-201ENSMUST00000213337 772 ntBASIC11.1□□□□□ -0.63
Upk1aQ9D132 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.1□□□□□ -0.63
Upk1aQ9D132 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.1□□□□□ -0.63
Upk1aQ9D132 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk1aQ9D132 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.09□□□□□ -0.63
Upk1aQ9D132 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Mospd4-201ENSMUST00000180618 576 ntBASIC11.09□□□□□ -0.63
Upk1aQ9D132 Gm5745-201ENSMUST00000183748 313 ntBASIC11.09□□□□□ -0.63
Upk1aQ9D132 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Gm38002-201ENSMUST00000193255 180 ntBASIC11.09□□□□□ -0.63
Upk1aQ9D132 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.09□□□□□ -0.63
Upk1aQ9D132 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Upk1aQ9D132 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Upk1aQ9D132 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.09□□□□□ -0.63
Upk1aQ9D132 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.09□□□□□ -0.63
Upk1aQ9D132 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms