Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm7783-201ENSMUST00000204795 781 ntBASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Gm8420-201ENSMUST00000097103 598 ntBASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim11Q99PQ2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Gm37259-201ENSMUST00000193903 849 ntBASIC13.38□□□□□ -0.27
Trim11Q99PQ2 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Gm44967-201ENSMUST00000207047 631 ntBASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Gm17827-201ENSMUST00000211825 742 ntBASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim11Q99PQ2 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Gm26361-201ENSMUST00000158868 186 ntBASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Gm5616-201ENSMUST00000165252 384 ntBASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Gm8741-201ENSMUST00000174736 384 ntBASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Gm8343-201ENSMUST00000182705 994 ntBASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Gm28196-201ENSMUST00000187719 640 ntBASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Gm17812-201ENSMUST00000204935 318 ntBASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Gm4157-201ENSMUST00000211647 679 ntBASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim11Q99PQ2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms