Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.36□□□□□ -0.75
Scrt1Q99M85 Gm2965-201ENSMUST00000198365 343 ntBASIC10.36□□□□□ -0.75
Scrt1Q99M85 Gm19091-201ENSMUST00000208120 978 ntBASIC10.36□□□□□ -0.75
Scrt1Q99M85 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.36□□□□□ -0.75
Scrt1Q99M85 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.36□□□□□ -0.75
Scrt1Q99M85 Gm6867-201ENSMUST00000219165 425 ntBASIC10.36□□□□□ -0.75
Scrt1Q99M85 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.36□□□□□ -0.75
Scrt1Q99M85 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.36□□□□□ -0.75
Scrt1Q99M85 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Scrt1Q99M85 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.36□□□□□ -0.75
Scrt1Q99M85 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Scrt1Q99M85 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Gm9645-201ENSMUST00000197131 792 ntBASIC10.35□□□□□ -0.75
Scrt1Q99M85 Gm44980-201ENSMUST00000205826 314 ntBASIC10.35□□□□□ -0.75
Scrt1Q99M85 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.35□□□□□ -0.75
Scrt1Q99M85 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.35□□□□□ -0.75
Scrt1Q99M85 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Scrt1Q99M85 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Scrt1Q99M85 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Gm13668-201ENSMUST00000119237 1001 ntBASIC10.34□□□□□ -0.75
Scrt1Q99M85 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.34□□□□□ -0.75
Scrt1Q99M85 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms