Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Gm12957-201ENSMUST00000117835 377 ntBASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Gm11511-201ENSMUST00000118146 540 ntBASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Gm8956-201ENSMUST00000203939 825 ntBASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap3Q99LM2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Gm11930-201ENSMUST00000117788 190 ntBASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Gm11439-201ENSMUST00000118598 409 ntBASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Gm31256-201ENSMUST00000194705 506 ntBASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap3Q99LM2 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 549.6 ms