Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cdk9Q99J95 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.84□□□□□ -0.51
Cdk9Q99J95 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.84□□□□□ -0.51
Cdk9Q99J95 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.84□□□□□ -0.51
Cdk9Q99J95 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Gm8062-201ENSMUST00000139696 444 ntBASIC11.84□□□□□ -0.51
Cdk9Q99J95 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Cdk9Q99J95 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.84□□□□□ -0.51
Cdk9Q99J95 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.84□□□□□ -0.51
Cdk9Q99J95 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdk9Q99J95 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdk9Q99J95 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Cdk9Q99J95 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdk9Q99J95 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdk9Q99J95 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.83□□□□□ -0.52
Cdk9Q99J95 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.83□□□□□ -0.52
Cdk9Q99J95 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Gm5370-201ENSMUST00000187187 574 ntBASIC11.83□□□□□ -0.52
Cdk9Q99J95 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.83□□□□□ -0.52
Cdk9Q99J95 Gm18584-201ENSMUST00000203098 964 ntBASIC11.83□□□□□ -0.52
Cdk9Q99J95 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.83□□□□□ -0.52
Cdk9Q99J95 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdk9Q99J95 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms