Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm8199-201ENSMUST00000121323 823 ntBASIC13.63□□□□□ -0.23
Smc1bQ920F6 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Gm22144-201ENSMUST00000157402 102 ntBASIC13.63□□□□□ -0.23
Smc1bQ920F6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Gm23771-201ENSMUST00000178702 110 ntBASIC13.63□□□□□ -0.23
Smc1bQ920F6 Gm18304-201ENSMUST00000189162 546 ntBASIC13.63□□□□□ -0.23
Smc1bQ920F6 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Gm3793-201ENSMUST00000204973 672 ntBASIC13.63□□□□□ -0.23
Smc1bQ920F6 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc1bQ920F6 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Gm24934-201ENSMUST00000103764 111 ntBASIC13.62□□□□□ -0.23
Smc1bQ920F6 Gm12857-201ENSMUST00000117678 592 ntBASIC13.62□□□□□ -0.23
Smc1bQ920F6 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Gm22442-201ENSMUST00000157256 144 ntBASIC13.62□□□□□ -0.23
Smc1bQ920F6 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.62□□□□□ -0.23
Smc1bQ920F6 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.62□□□□□ -0.23
Smc1bQ920F6 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Gm27910-201ENSMUST00000185004 107 ntBASIC13.62□□□□□ -0.23
Smc1bQ920F6 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Gm4157-201ENSMUST00000211647 679 ntBASIC13.62□□□□□ -0.23
Smc1bQ920F6 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Map1b-203ENSMUST00000223725 2669 ntBASIC13.62□□□□□ -0.23
Smc1bQ920F6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.62□□□□□ -0.23
Smc1bQ920F6 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.61□□□□□ -0.23
Smc1bQ920F6 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.61□□□□□ -0.23
Smc1bQ920F6 Gm12899-201ENSMUST00000120565 551 ntBASIC13.61□□□□□ -0.23
Smc1bQ920F6 Gm12628-201ENSMUST00000122193 382 ntBASIC13.61□□□□□ -0.23
Smc1bQ920F6 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smc1bQ920F6 Gm8343-201ENSMUST00000182705 994 ntBASIC13.61□□□□□ -0.23
Smc1bQ920F6 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.61□□□□□ -0.23
Smc1bQ920F6 Gm19091-201ENSMUST00000208120 978 ntBASIC13.61□□□□□ -0.23
Smc1bQ920F6 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smc1bQ920F6 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.61□□□□□ -0.23
Smc1bQ920F6 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms