Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm20778-201ENSMUST00000178524 627 ntBASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm27572-201ENSMUST00000183702 255 ntBASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm37005-201ENSMUST00000193281 1164 ntBASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm19253-201ENSMUST00000204279 307 ntBASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 RMST_1.1-211ENSMUST00000219726 783 ntTSL 3 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 AC173482.3-201ENSMUST00000225492 1212 ntBASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Pcdhb3Q91XZ7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Mir6420-201ENSMUST00000185032 102 ntBASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gm19269-201ENSMUST00000211401 804 ntBASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gm43216-201ENSMUST00000196295 1333 ntBASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Gm7961-201ENSMUST00000201338 1436 ntBASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pcdhb3Q91XZ7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhb3Q91XZ7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms