Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb5Q91XZ5 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb5Q91XZ5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb5Q91XZ5 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb5Q91XZ5 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb5Q91XZ5 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhb5Q91XZ5 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb5Q91XZ5 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb5Q91XZ5 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb5Q91XZ5 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.83□□□□□ -0.2
Pcdhb5Q91XZ5 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb5Q91XZ5 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb5Q91XZ5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhb5Q91XZ5 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Gm3765-201ENSMUST00000130985 1447 ntBASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Gm12628-201ENSMUST00000122193 382 ntBASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Gm9139-201ENSMUST00000218817 700 ntBASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Pcdhb5Q91XZ5 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Gm26134-201ENSMUST00000178484 110 ntBASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.81□□□□□ -0.2
Pcdhb5Q91XZ5 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb5Q91XZ5 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb5Q91XZ5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb5Q91XZ5 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb5Q91XZ5 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb5Q91XZ5 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb5Q91XZ5 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb5Q91XZ5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms