Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trex1Q91XB0 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trex1Q91XB0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trex1Q91XB0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Trex1Q91XB0 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trex1Q91XB0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.43□□□□□ -0.26
Trex1Q91XB0 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trex1Q91XB0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trex1Q91XB0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Gm15549-201ENSMUST00000121595 622 ntBASIC13.42□□□□□ -0.26
Trex1Q91XB0 Gm12628-201ENSMUST00000122193 382 ntBASIC13.42□□□□□ -0.26
Trex1Q91XB0 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Gm20495-201ENSMUST00000173902 235 ntBASIC13.42□□□□□ -0.26
Trex1Q91XB0 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.42□□□□□ -0.26
Trex1Q91XB0 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trex1Q91XB0 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.42□□□□□ -0.26
Trex1Q91XB0 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.42□□□□□ -0.26
Trex1Q91XB0 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.42□□□□□ -0.26
Trex1Q91XB0 Gm3017-201ENSMUST00000203603 1126 ntBASIC13.42□□□□□ -0.26
Trex1Q91XB0 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.42□□□□□ -0.26
Trex1Q91XB0 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.42□□□□□ -0.26
Trex1Q91XB0 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.42□□□□□ -0.26
Trex1Q91XB0 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.42□□□□□ -0.26
Trex1Q91XB0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trex1Q91XB0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.41□□□□□ -0.26
Trex1Q91XB0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.41□□□□□ -0.26
Trex1Q91XB0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.41□□□□□ -0.26
Trex1Q91XB0 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Gm15329-201ENSMUST00000121408 155 ntBASIC13.41□□□□□ -0.26
Trex1Q91XB0 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Gm26134-201ENSMUST00000178484 110 ntBASIC13.41□□□□□ -0.26
Trex1Q91XB0 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Gm18561-201ENSMUST00000206027 804 ntBASIC13.41□□□□□ -0.26
Trex1Q91XB0 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.41□□□□□ -0.26
Trex1Q91XB0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Paupar-201ENSMUST00000194826 3482 ntBASIC13.41□□□□□ -0.26
Trex1Q91XB0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trex1Q91XB0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trex1Q91XB0 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms