Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Gm14832-201ENSMUST00000121289 322 ntBASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Snora73a-201ENSMUST00000082453 205 ntBASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.56□□□□□ -0.88
Nup35Q8R4R6 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nup35Q8R4R6 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Gm7722-201ENSMUST00000120646 741 ntBASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Gm13316-201ENSMUST00000140537 691 ntBASIC9.55□□□□□ -0.88
Nup35Q8R4R6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Gm25043-201ENSMUST00000158604 212 ntBASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Gm40466-201ENSMUST00000212174 422 ntBASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nup35Q8R4R6 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.54□□□□□ -0.88
Nup35Q8R4R6 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Gm24845-201ENSMUST00000158034 109 ntBASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.54□□□□□ -0.88
Nup35Q8R4R6 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms