Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.46□□□□□ -0.74
ShfQ8CG80 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
ShfQ8CG80 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.46□□□□□ -0.74
ShfQ8CG80 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.46□□□□□ -0.74
ShfQ8CG80 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
ShfQ8CG80 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
ShfQ8CG80 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
ShfQ8CG80 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
ShfQ8CG80 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.45□□□□□ -0.74
ShfQ8CG80 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.45□□□□□ -0.74
ShfQ8CG80 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.45□□□□□ -0.74
ShfQ8CG80 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
ShfQ8CG80 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
ShfQ8CG80 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm11500-201ENSMUST00000118237 601 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm28937-201ENSMUST00000185413 695 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm29400-201ENSMUST00000187208 695 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm28662-201ENSMUST00000188446 695 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm28251-201ENSMUST00000188835 695 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm32999-201ENSMUST00000192693 562 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm37318-201ENSMUST00000194325 695 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm38017-201ENSMUST00000194768 695 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm37287-201ENSMUST00000195449 695 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm37793-201ENSMUST00000195548 695 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm6450-201ENSMUST00000200896 574 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.45□□□□□ -0.74
ShfQ8CG80 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm21769-201ENSMUST00000211922 111 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Gm18935-201ENSMUST00000212692 664 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Gzmn-202ENSMUST00000225535 989 ntBASIC10.45□□□□□ -0.74
ShfQ8CG80 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
ShfQ8CG80 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
ShfQ8CG80 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
ShfQ8CG80 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
ShfQ8CG80 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.45□□□□□ -0.74
ShfQ8CG80 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
ShfQ8CG80 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
ShfQ8CG80 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
ShfQ8CG80 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.44□□□□□ -0.74
ShfQ8CG80 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
ShfQ8CG80 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.44□□□□□ -0.74
ShfQ8CG80 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ShfQ8CG80 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ShfQ8CG80 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
ShfQ8CG80 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
ShfQ8CG80 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.44□□□□□ -0.74
ShfQ8CG80 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
ShfQ8CG80 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ShfQ8CG80 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
ShfQ8CG80 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
ShfQ8CG80 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
ShfQ8CG80 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.44□□□□□ -0.74
ShfQ8CG80 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.44□□□□□ -0.74
ShfQ8CG80 Gm12241-201ENSMUST00000118330 726 ntBASIC10.44□□□□□ -0.74
ShfQ8CG80 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms