Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm8062-201ENSMUST00000139696 444 ntBASIC14.48□□□□□ -0.09
Smc5Q8CG46 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.48□□□□□ -0.09
Smc5Q8CG46 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Gm36957-201ENSMUST00000192982 2824 ntBASIC14.48□□□□□ -0.09
Smc5Q8CG46 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smc5Q8CG46 Gm19178-201ENSMUST00000217524 1819 ntBASIC14.48□□□□□ -0.09
Smc5Q8CG46 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Smc5Q8CG46 AC211878.3-201ENSMUST00000222629 2018 ntBASIC14.48□□□□□ -0.09
Smc5Q8CG46 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Gm4310-201ENSMUST00000177847 889 ntBASIC14.47□□□□□ -0.09
Smc5Q8CG46 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.47□□□□□ -0.09
Smc5Q8CG46 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC14.47□□□□□ -0.09
Smc5Q8CG46 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Gm21769-201ENSMUST00000211922 111 ntBASIC14.47□□□□□ -0.09
Smc5Q8CG46 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.47□□□□□ -0.09
Smc5Q8CG46 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.47□□□□□ -0.09
Smc5Q8CG46 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Smc5Q8CG46 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smc5Q8CG46 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.46□□□□□ -0.09
Smc5Q8CG46 Gm6157-201ENSMUST00000199935 1897 ntBASIC14.46□□□□□ -0.09
Smc5Q8CG46 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smc5Q8CG46 AC159195.3-201ENSMUST00000225162 2211 ntBASIC14.46□□□□□ -0.09
Smc5Q8CG46 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Gm9035-201ENSMUST00000218318 1697 ntBASIC14.46□□□□□ -0.09
Smc5Q8CG46 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Btrc-209ENSMUST00000224478 2194 ntBASIC14.46□□□□□ -0.09
Smc5Q8CG46 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Gm3329-201ENSMUST00000159873 556 ntBASIC14.46□□□□□ -0.09
Smc5Q8CG46 Gm27572-201ENSMUST00000183702 255 ntBASIC14.46□□□□□ -0.09
Smc5Q8CG46 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Smc5Q8CG46 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms