Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Gm11700-201ENSMUST00000119409 403 ntBASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Gm15547-201ENSMUST00000122152 333 ntBASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc87Q8CDL9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Gm28882-201ENSMUST00000185504 314 ntBASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc87Q8CDL9 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc87Q8CDL9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc87Q8CDL9 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms