Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcpip1Q8CDG3 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Gm14263-201ENSMUST00000117955 746 ntBASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Gm11511-201ENSMUST00000118146 540 ntBASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Gm27046-201ENSMUST00000182160 463 ntBASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Gm43002-201ENSMUST00000200310 155 ntBASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vcpip1Q8CDG3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcpip1Q8CDG3 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms