Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Gm24891-201ENSMUST00000104391 136 ntBASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 AC134869.4-202ENSMUST00000224350 837 ntBASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc60Q8C4J0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Gm11783-201ENSMUST00000119549 885 ntBASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Mir8093-201ENSMUST00000185043 137 ntBASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc60Q8C4J0 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc60Q8C4J0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc60Q8C4J0 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.96□□□□□ -0.02
Ccdc60Q8C4J0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 AC124397.2-201ENSMUST00000225575 2215 ntBASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Gm23251-201ENSMUST00000103773 110 ntBASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.95□□□□□ -0.02
Ccdc60Q8C4J0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ccdc60Q8C4J0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms