Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Gm15207-201ENSMUST00000119259 442 ntBASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Gm7940-201ENSMUST00000218195 769 ntBASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Gm18065-201ENSMUST00000221395 526 ntBASIC12.1□□□□□ -0.47
Trub1Q8C0D0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trub1Q8C0D0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.09□□□□□ -0.47
Trub1Q8C0D0 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Gm4857-201ENSMUST00000192718 785 ntBASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trub1Q8C0D0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trub1Q8C0D0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trub1Q8C0D0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trub1Q8C0D0 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.08□□□□□ -0.47
Trub1Q8C0D0 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trub1Q8C0D0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Gm11663-201ENSMUST00000117888 290 ntBASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Gm8566-201ENSMUST00000120174 465 ntBASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.08□□□□□ -0.48
Trub1Q8C0D0 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms