Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Gm10312-201ENSMUST00000078515 489 ntBASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Cdhr3Q8BL00 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Gm26956-201ENSMUST00000182176 986 ntBASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Gm19287-201ENSMUST00000203190 358 ntBASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Gm45880-201ENSMUST00000213041 853 ntBASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cdhr3Q8BL00 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Gm37489-201ENSMUST00000191883 159 ntBASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Gm4607-201ENSMUST00000206649 577 ntBASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Gm10608-202ENSMUST00000213924 676 ntBASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cdhr3Q8BL00 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms