Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Gm11949-201ENSMUST00000117640 372 ntBASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Gm6485-201ENSMUST00000160676 439 ntBASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Gm6867-201ENSMUST00000219165 425 ntBASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.54□□□□□ -0.4
Usp1Q8BJQ2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Gm12795-201ENSMUST00000117594 539 ntBASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Gm9645-201ENSMUST00000197131 792 ntBASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Gm44506-201ENSMUST00000206278 965 ntBASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Gm6108-201ENSMUST00000208365 367 ntBASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp1Q8BJQ2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Usp1Q8BJQ2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp1Q8BJQ2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp1Q8BJQ2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms