Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Chmp2bQ8BJF9 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Rgr-203ENSMUST00000225070 4704 ntBASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Gm38241-201ENSMUST00000192641 898 ntBASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Gm19309-201ENSMUST00000218295 205 ntBASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Gm7046-201ENSMUST00000221351 977 ntBASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2bQ8BJF9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Gm11700-201ENSMUST00000119409 403 ntBASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Gm13786-201ENSMUST00000122371 333 ntBASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Gm5745-201ENSMUST00000183748 313 ntBASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Gm37489-201ENSMUST00000191883 159 ntBASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Gm8712-201ENSMUST00000221090 701 ntBASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.03□□□□□ -0.48
Chmp2bQ8BJF9 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.48
Chmp2bQ8BJF9 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms