Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdh19Q80TF3 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Map1b-203ENSMUST00000223725 2669 ntBASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Gm15573-201ENSMUST00000119487 540 ntBASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Gm12849-201ENSMUST00000120013 739 ntBASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Gm17831-201ENSMUST00000205579 900 ntBASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh19Q80TF3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm12579-201ENSMUST00000118040 783 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm8731-201ENSMUST00000118088 412 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm11783-201ENSMUST00000119549 885 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm15595-201ENSMUST00000120840 961 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm13899-201ENSMUST00000121519 1255 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm14363-201ENSMUST00000122304 409 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Mir6546-201ENSMUST00000184460 62 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm28937-201ENSMUST00000185413 695 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm29400-201ENSMUST00000187208 695 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm28662-201ENSMUST00000188446 695 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm28251-201ENSMUST00000188835 695 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm37318-201ENSMUST00000194325 695 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm38017-201ENSMUST00000194768 695 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm37287-201ENSMUST00000195449 695 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm37793-201ENSMUST00000195548 695 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh19Q80TF3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms