Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Gm11502-201ENSMUST00000120917 1211 ntBASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Gm12453-201ENSMUST00000121981 331 ntBASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Gm22846-201ENSMUST00000157706 270 ntBASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Gm17070-201ENSMUST00000170463 784 ntBASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Gm20414-201ENSMUST00000172918 646 ntBASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Gm24809-201ENSMUST00000175318 271 ntBASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Gm18499-201ENSMUST00000220808 1021 ntBASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ddx55Q6ZPL9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Gm11619-201ENSMUST00000117474 237 ntBASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Gm13019-201ENSMUST00000120000 276 ntBASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Gm16030-201ENSMUST00000159098 603 ntBASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Gm23694-201ENSMUST00000179335 110 ntBASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Gm42779-201ENSMUST00000198807 406 ntBASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.34□□□□□ -0.27
Ddx55Q6ZPL9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ddx55Q6ZPL9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.33□□□□□ -0.27
Ddx55Q6ZPL9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ddx55Q6ZPL9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ddx55Q6ZPL9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Ddx55Q6ZPL9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ddx55Q6ZPL9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Ddx55Q6ZPL9 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Gm15528-201ENSMUST00000117821 864 ntBASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Gm14993-201ENSMUST00000121180 164 ntBASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ddx55Q6ZPL9 Gm5870-201ENSMUST00000196461 282 ntBASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms