Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC9.97□□□□□ -0.81
Rif1Q6PR54 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Gm3379-201ENSMUST00000222259 642 ntBASIC9.97□□□□□ -0.81
Rif1Q6PR54 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Rif1Q6PR54 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Gm42928-201ENSMUST00000197338 3339 ntBASIC9.97□□□□□ -0.81
Rif1Q6PR54 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rif1Q6PR54 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rif1Q6PR54 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Rif1Q6PR54 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Rif1Q6PR54 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
Rif1Q6PR54 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rif1Q6PR54 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.81
Rif1Q6PR54 Gm24933-201ENSMUST00000103762 110 ntBASIC9.96□□□□□ -0.81
Rif1Q6PR54 Gm23252-201ENSMUST00000103776 110 ntBASIC9.96□□□□□ -0.81
Rif1Q6PR54 Gm13505-201ENSMUST00000121666 817 ntBASIC9.96□□□□□ -0.81
Rif1Q6PR54 Gm7805-201ENSMUST00000154348 448 ntBASIC9.96□□□□□ -0.81
Rif1Q6PR54 Gm27826-201ENSMUST00000175282 255 ntBASIC9.96□□□□□ -0.81
Rif1Q6PR54 Gm26443-201ENSMUST00000179610 110 ntBASIC9.96□□□□□ -0.81
Rif1Q6PR54 Gm9162-201ENSMUST00000182081 991 ntBASIC9.96□□□□□ -0.81
Rif1Q6PR54 Gm7572-201ENSMUST00000182616 766 ntBASIC9.96□□□□□ -0.81
Rif1Q6PR54 Gm28180-201ENSMUST00000189608 722 ntBASIC9.96□□□□□ -0.81
Rif1Q6PR54 Gm43117-201ENSMUST00000198531 379 ntBASIC9.96□□□□□ -0.81
Rif1Q6PR54 Gm40332-201ENSMUST00000199847 938 ntBASIC9.96□□□□□ -0.81
Rif1Q6PR54 AC125409.3-201ENSMUST00000223488 653 ntBASIC9.96□□□□□ -0.81
Rif1Q6PR54 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.96□□□□□ -0.81
Rif1Q6PR54 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rif1Q6PR54 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Rif1Q6PR54 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.81
Rif1Q6PR54 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rif1Q6PR54 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rif1Q6PR54 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rif1Q6PR54 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Rif1Q6PR54 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rif1Q6PR54 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.96□□□□□ -0.82
Rif1Q6PR54 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Mir453-201ENSMUST00000104732 82 ntBASIC9.96□□□□□ -0.82
Rif1Q6PR54 Mir1249-201ENSMUST00000116791 98 ntBASIC9.96□□□□□ -0.82
Rif1Q6PR54 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Gm16184-201ENSMUST00000162324 573 ntBASIC9.96□□□□□ -0.82
Rif1Q6PR54 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Gm27440-201ENSMUST00000184785 107 ntBASIC9.96□□□□□ -0.82
Rif1Q6PR54 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Gm19931-201ENSMUST00000198920 368 ntBASIC9.96□□□□□ -0.82
Rif1Q6PR54 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.96□□□□□ -0.82
Rif1Q6PR54 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC9.96□□□□□ -0.82
Rif1Q6PR54 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.95□□□□□ -0.82
Rif1Q6PR54 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm12240-201ENSMUST00000120178 229 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm11660-201ENSMUST00000120955 412 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm23555-201ENSMUST00000157815 135 ntBASIC9.95□□□□□ -0.82
Rif1Q6PR54 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Rif1Q6PR54 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms