Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Scaf4Q6PFF0 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gm6023-201ENSMUST00000118217 606 ntBASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Scaf4Q6PFF0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gm27731-201ENSMUST00000185192 107 ntBASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gm38158-201ENSMUST00000194617 339 ntBASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Scaf4Q6PFF0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Gm11531-201ENSMUST00000117614 555 ntBASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Scaf4Q6PFF0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms