Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gm11980-201ENSMUST00000121445 986 ntBASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gm20392-201ENSMUST00000173047 701 ntBASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gm42433-201ENSMUST00000196806 940 ntBASIC13.62□□□□□ -0.23
Nup98Q6PFD9 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gm44814-201ENSMUST00000207018 434 ntBASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Gm9102-201ENSMUST00000219250 465 ntBASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nup98Q6PFD9 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Gm12663-201ENSMUST00000118481 958 ntBASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Gm13422-201ENSMUST00000118834 504 ntBASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Gm13445-201ENSMUST00000121664 307 ntBASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Gm18201-201ENSMUST00000174735 875 ntBASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup98Q6PFD9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Capsl-202ENSMUST00000226688 739 ntBASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.6□□□□□ -0.23
Nup98Q6PFD9 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms