Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Map1b-203ENSMUST00000223725 2669 ntBASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Snrnp40Q6PE01 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Gm14274-201ENSMUST00000117182 615 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Gm12218-201ENSMUST00000117666 399 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Gm11979-201ENSMUST00000119629 743 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Gm43163-201ENSMUST00000196571 442 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Gm6423-201ENSMUST00000204315 934 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Gm7082-201ENSMUST00000209880 969 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Gm6390-201ENSMUST00000215034 589 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Gm5468-202ENSMUST00000227851 682 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Gm4978-201ENSMUST00000071565 801 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Gm11470-201ENSMUST00000118868 1475 ntBASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Snrnp40Q6PE01 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.75
Snrnp40Q6PE01 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gm13422-201ENSMUST00000118834 504 ntBASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gm15003-201ENSMUST00000118884 446 ntBASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gm12943-201ENSMUST00000119616 210 ntBASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Snrnp40Q6PE01 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms