Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Gm22119-201ENSMUST00000175594 99 ntBASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Gm6745-201ENSMUST00000199216 526 ntBASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Gm10146-201ENSMUST00000072739 309 ntBASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Rnf220Q6PDX6 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Gm9002-201ENSMUST00000178437 499 ntBASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Gm4768-201ENSMUST00000206199 686 ntBASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.13□□□□□ -0.63
Rnf220Q6PDX6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Gm12384-201ENSMUST00000119228 919 ntBASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Gm4271-201ENSMUST00000174444 973 ntBASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Gm27892-201ENSMUST00000185017 106 ntBASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 Gm32025-201ENSMUST00000217960 307 ntBASIC11.12□□□□□ -0.63
Rnf220Q6PDX6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms