Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc2Q6PDG5 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc2Q6PDG5 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc2Q6PDG5 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.72□□□□□ -0.21
Smarcc2Q6PDG5 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Smarcc2Q6PDG5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Smarcc2Q6PDG5 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Gm25732-201ENSMUST00000175168 60 ntBASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Gm5705-201ENSMUST00000066241 711 ntBASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcc2Q6PDG5 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcc2Q6PDG5 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.71□□□□□ -0.22
Smarcc2Q6PDG5 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcc2Q6PDG5 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcc2Q6PDG5 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Smarcc2Q6PDG5 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcc2Q6PDG5 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcc2Q6PDG5 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcc2Q6PDG5 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.71□□□□□ -0.22
Smarcc2Q6PDG5 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Mir5120-201ENSMUST00000175020 78 ntBASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Gm43184-201ENSMUST00000197247 542 ntBASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Gm43002-201ENSMUST00000200310 155 ntBASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Gm270-201ENSMUST00000223010 976 ntBASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Lect2-202ENSMUST00000225183 823 ntBASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcc2Q6PDG5 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc2Q6PDG5 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc2Q6PDG5 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Smarcc2Q6PDG5 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc2Q6PDG5 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.69□□□□□ -0.22
Smarcc2Q6PDG5 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc2Q6PDG5 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc2Q6PDG5 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcc2Q6PDG5 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms