Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Gm8111-201ENSMUST00000117659 987 ntBASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Gm37028-201ENSMUST00000194276 107 ntBASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Gm42816-201ENSMUST00000198433 325 ntBASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Smchd1Q6P5D8 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Gm5100-201ENSMUST00000195631 589 ntBASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Gm3793-201ENSMUST00000204973 672 ntBASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Gm26013-201ENSMUST00000104404 119 ntBASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Gm17877-201ENSMUST00000192578 814 ntBASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.81□□□□□ -0.36
Smchd1Q6P5D8 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Smchd1Q6P5D8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smchd1Q6P5D8 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smchd1Q6P5D8 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Smchd1Q6P5D8 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms