Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm10312-201ENSMUST00000078515 489 ntBASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Krt39Q6IFX4 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Gm4607-201ENSMUST00000206649 577 ntBASIC12.97□□□□□ -0.33
Krt39Q6IFX4 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Krt39Q6IFX4 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm11439-201ENSMUST00000118598 409 ntBASIC12.96□□□□□ -0.33
Krt39Q6IFX4 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm43758-201ENSMUST00000199500 367 ntBASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm7783-201ENSMUST00000204795 781 ntBASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm30285-201ENSMUST00000214614 422 ntBASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.96□□□□□ -0.33
Krt39Q6IFX4 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt39Q6IFX4 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt39Q6IFX4 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms