Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Gm13182-201ENSMUST00000122241 312 ntBASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Gm4654-201ENSMUST00000183305 982 ntBASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Gm44421-201ENSMUST00000205064 1221 ntBASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 AC122350.1-201ENSMUST00000228135 533 ntBASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pdzrn3Q69ZS0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Gm6407-201ENSMUST00000176468 549 ntBASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Gm4310-201ENSMUST00000177847 889 ntBASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Gm37028-201ENSMUST00000194276 107 ntBASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Gm2553-201ENSMUST00000215986 605 ntBASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pdzrn3Q69ZS0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Gm11340-201ENSMUST00000119226 412 ntBASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Gm2875-201ENSMUST00000211333 360 ntBASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Gm6867-201ENSMUST00000219165 425 ntBASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pdzrn3Q69ZS0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms