Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Scn9aQ62205 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm1826-201ENSMUST00000118646 1162 ntBASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm15707-201ENSMUST00000118804 996 ntBASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.6□□□□□ -0.23
Scn9aQ62205 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.6□□□□□ -0.23
Scn9aQ62205 CT025603.1-201ENSMUST00000224040 448 ntBASIC13.6□□□□□ -0.23
Scn9aQ62205 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Scn9aQ62205 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Scn9aQ62205 Gm43167-201ENSMUST00000202001 1606 ntBASIC13.6□□□□□ -0.23
Scn9aQ62205 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.59□□□□□ -0.23
Scn9aQ62205 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Scn9aQ62205 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn9aQ62205 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.59□□□□□ -0.23
Scn9aQ62205 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn9aQ62205 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.59□□□□□ -0.23
Scn9aQ62205 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Scn9aQ62205 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Scn9aQ62205 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.59□□□□□ -0.23
Scn9aQ62205 Gm37207-201ENSMUST00000194284 296 ntBASIC13.59□□□□□ -0.23
Scn9aQ62205 Gm43547-201ENSMUST00000197729 328 ntBASIC13.59□□□□□ -0.23
Scn9aQ62205 Gm35960-201ENSMUST00000202712 767 ntBASIC13.59□□□□□ -0.23
Scn9aQ62205 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC13.59□□□□□ -0.23
Scn9aQ62205 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn9aQ62205 AC134537.1-201ENSMUST00000219205 265 ntBASIC13.59□□□□□ -0.23
Scn9aQ62205 Gm18065-201ENSMUST00000221395 526 ntBASIC13.59□□□□□ -0.23
Scn9aQ62205 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.59□□□□□ -0.23
Scn9aQ62205 CT025689.1-201ENSMUST00000225214 283 ntBASIC13.59□□□□□ -0.23
Scn9aQ62205 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Scn9aQ62205 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Scn9aQ62205 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.59□□□□□ -0.23
Scn9aQ62205 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Scn9aQ62205 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.59□□□□□ -0.23
Scn9aQ62205 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Scn9aQ62205 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scn9aQ62205 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Scn9aQ62205 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Scn9aQ62205 Gm8302-201ENSMUST00000119217 852 ntBASIC13.58□□□□□ -0.24
Scn9aQ62205 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.58□□□□□ -0.24
Scn9aQ62205 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.58□□□□□ -0.24
Scn9aQ62205 Ighv1-86-201ENSMUST00000200562 353 ntBASIC13.58□□□□□ -0.24
Scn9aQ62205 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.58□□□□□ -0.24
Scn9aQ62205 AC129975.1-201ENSMUST00000224816 592 ntBASIC13.58□□□□□ -0.24
Scn9aQ62205 AC102847.1-202ENSMUST00000226313 1245 ntBASIC13.58□□□□□ -0.24
Scn9aQ62205 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.58□□□□□ -0.24
Scn9aQ62205 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.58□□□□□ -0.24
Scn9aQ62205 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Scn9aQ62205 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC13.58□□□□□ -0.24
Scn9aQ62205 Gm13286-201ENSMUST00000117750 537 ntBASIC13.58□□□□□ -0.24
Scn9aQ62205 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC13.58□□□□□ -0.24
Scn9aQ62205 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Scn9aQ62205 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Scn9aQ62205 Gm29808-201ENSMUST00000194419 468 ntBASIC13.58□□□□□ -0.24
Scn9aQ62205 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms