Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.96□□□□□ -0.33
Ift88Q61371 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Gm6963-201ENSMUST00000147879 379 ntBASIC12.96□□□□□ -0.33
Ift88Q61371 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.96□□□□□ -0.33
Ift88Q61371 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.96□□□□□ -0.33
Ift88Q61371 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Gm19187-201ENSMUST00000206781 892 ntBASIC12.96□□□□□ -0.33
Ift88Q61371 Gm18054-201ENSMUST00000207539 555 ntBASIC12.96□□□□□ -0.33
Ift88Q61371 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ift88Q61371 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ift88Q61371 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.96□□□□□ -0.34
Ift88Q61371 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.96□□□□□ -0.34
Ift88Q61371 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.96□□□□□ -0.34
Ift88Q61371 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ift88Q61371 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ift88Q61371 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ift88Q61371 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.96□□□□□ -0.34
Ift88Q61371 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ift88Q61371 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ift88Q61371 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ift88Q61371 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.96□□□□□ -0.34
Ift88Q61371 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ift88Q61371 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ift88Q61371 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.96□□□□□ -0.34
Ift88Q61371 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ift88Q61371 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ift88Q61371 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ift88Q61371 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ift88Q61371 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.95□□□□□ -0.34
Ift88Q61371 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ift88Q61371 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.95□□□□□ -0.34
Ift88Q61371 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.95□□□□□ -0.34
Ift88Q61371 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.95□□□□□ -0.34
Ift88Q61371 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ift88Q61371 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Gm23270-201ENSMUST00000104055 131 ntBASIC12.95□□□□□ -0.34
Ift88Q61371 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ift88Q61371 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.95□□□□□ -0.34
Ift88Q61371 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.95□□□□□ -0.34
Ift88Q61371 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ift88Q61371 Gm807-202ENSMUST00000224929 408 ntBASIC12.95□□□□□ -0.34
Ift88Q61371 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ift88Q61371 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.95□□□□□ -0.34
Ift88Q61371 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Erich3-203ENSMUST00000189969 3460 ntBASIC12.95□□□□□ -0.34
Ift88Q61371 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ift88Q61371 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ift88Q61371 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ift88Q61371 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.95□□□□□ -0.34
Ift88Q61371 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ift88Q61371 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ift88Q61371 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ift88Q61371 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ift88Q61371 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.94□□□□□ -0.34
Ift88Q61371 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.94□□□□□ -0.34
Ift88Q61371 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ift88Q61371 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms