Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm28224-201ENSMUST00000186078 697 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm29001-201ENSMUST00000186177 697 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm28292-201ENSMUST00000186593 697 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm28101-201ENSMUST00000187608 697 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm29076-201ENSMUST00000187689 697 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm28302-201ENSMUST00000187931 697 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm28646-201ENSMUST00000188220 697 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm28205-201ENSMUST00000189177 697 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm29032-201ENSMUST00000189797 697 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm28695-201ENSMUST00000190300 697 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm37448-201ENSMUST00000192795 697 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm38314-201ENSMUST00000195709 625 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Rps4l-202ENSMUST00000204242 789 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Olfr582-201ENSMUST00000098212 960 ntBASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim38Q5SZ99 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim38Q5SZ99 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim38Q5SZ99 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim38Q5SZ99 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.21□□□□□ -0.46
Trim38Q5SZ99 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim38Q5SZ99 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim38Q5SZ99 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim38Q5SZ99 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Gm13996-201ENSMUST00000118456 430 ntBASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Gm7584-201ENSMUST00000175829 940 ntBASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Gm43002-201ENSMUST00000200310 155 ntBASIC12.2□□□□□ -0.46
Trim38Q5SZ99 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim38Q5SZ99 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim38Q5SZ99 Gm17376-201ENSMUST00000166016 84 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms