Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm5866-201ENSMUST00000177881 973 ntBASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm9002-201ENSMUST00000178437 499 ntBASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm6180-201ENSMUST00000065243 498 ntBASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.13□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm43579-201ENSMUST00000202387 1307 ntBASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm12960-201ENSMUST00000120017 1066 ntBASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm27682-201ENSMUST00000183930 110 ntBASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm29649-201ENSMUST00000185649 419 ntBASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm7067-201ENSMUST00000207698 1249 ntBASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm9908-201ENSMUST00000211534 448 ntBASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav15-1-dv6-1Q5R1D2 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms