Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.5□□□□□ -0.41
Syne3Q4FZC9 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Syne3Q4FZC9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 BC043934-202ENSMUST00000185694 2356 ntBASIC12.49□□□□□ -0.41
Syne3Q4FZC9 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Gm5706-201ENSMUST00000181525 993 ntBASIC12.49□□□□□ -0.41
Syne3Q4FZC9 AY036118-201ENSMUST00000200021 923 ntBASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Gm44487-201ENSMUST00000205145 325 ntBASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Gm5455-201ENSMUST00000058710 715 ntBASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Syne3Q4FZC9 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Gm28071-201ENSMUST00000190355 478 ntBASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Gm18056-201ENSMUST00000207670 568 ntBASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Gm18061-201ENSMUST00000208350 562 ntBASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Gm18063-201ENSMUST00000208529 568 ntBASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Gm18052-201ENSMUST00000208750 559 ntBASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.48□□□□□ -0.41
Syne3Q4FZC9 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.48□□□□□ -0.41
Syne3Q4FZC9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Syne3Q4FZC9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms