Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.85□□□□□ -0.19
Limch1Q3UH68 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Limch1Q3UH68 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.85□□□□□ -0.19
Limch1Q3UH68 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Gm13408-201ENSMUST00000119822 798 ntBASIC13.85□□□□□ -0.19
Limch1Q3UH68 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.85□□□□□ -0.19
Limch1Q3UH68 Gm13935-201ENSMUST00000121859 798 ntBASIC13.85□□□□□ -0.19
Limch1Q3UH68 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Limch1Q3UH68 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.85□□□□□ -0.19
Limch1Q3UH68 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.85□□□□□ -0.19
Limch1Q3UH68 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.85□□□□□ -0.19
Limch1Q3UH68 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Limch1Q3UH68 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.84□□□□□ -0.19
Limch1Q3UH68 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.84□□□□□ -0.19
Limch1Q3UH68 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.84□□□□□ -0.19
Limch1Q3UH68 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Gm6114-201ENSMUST00000182472 968 ntBASIC13.84□□□□□ -0.19
Limch1Q3UH68 Gm45770-201ENSMUST00000212105 616 ntBASIC13.84□□□□□ -0.19
Limch1Q3UH68 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Gm5455-201ENSMUST00000058710 715 ntBASIC13.84□□□□□ -0.19
Limch1Q3UH68 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.84□□□□□ -0.19
Limch1Q3UH68 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limch1Q3UH68 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Limch1Q3UH68 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Limch1Q3UH68 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.83□□□□□ -0.19
Limch1Q3UH68 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Limch1Q3UH68 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.83□□□□□ -0.2
Limch1Q3UH68 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.83□□□□□ -0.2
Limch1Q3UH68 Gm9192-201ENSMUST00000183221 985 ntBASIC13.83□□□□□ -0.2
Limch1Q3UH68 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.83□□□□□ -0.2
Limch1Q3UH68 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.83□□□□□ -0.2
Limch1Q3UH68 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Limch1Q3UH68 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms