Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ssbp4Q3U4B1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gm11246-201ENSMUST00000120880 345 ntBASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gm14460-201ENSMUST00000121511 639 ntBASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gm9192-201ENSMUST00000183221 985 ntBASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gm44506-201ENSMUST00000206278 965 ntBASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gm18636-201ENSMUST00000218846 1066 ntBASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gm18974-201ENSMUST00000221478 1031 ntBASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Ssbp4Q3U4B1 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Ssbp4Q3U4B1 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms