Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Gm9192-201ENSMUST00000183221 985 ntBASIC12.47□□□□□ -0.41
Trim43aQ3TL54 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Gm807-202ENSMUST00000224929 408 ntBASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.47□□□□□ -0.41
Trim43aQ3TL54 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim43aQ3TL54 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Gm14723-201ENSMUST00000118686 215 ntBASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Gm7722-201ENSMUST00000120646 741 ntBASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim43aQ3TL54 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43aQ3TL54 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Trim43aQ3TL54 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43aQ3TL54 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Trim43aQ3TL54 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43aQ3TL54 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43aQ3TL54 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43aQ3TL54 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43aQ3TL54 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43aQ3TL54 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim43aQ3TL54 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Gm4986-201ENSMUST00000119731 549 ntBASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Gm2546-201ENSMUST00000182630 991 ntBASIC12.45□□□□□ -0.42
Trim43aQ3TL54 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.45□□□□□ -0.42
Trim43aQ3TL54 Gm21769-201ENSMUST00000211922 111 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms