Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trpm1Q2TV84 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Gm43152-201ENSMUST00000202495 1638 ntBASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Gm22495-201ENSMUST00000104492 126 ntBASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Gm4917-201ENSMUST00000121452 650 ntBASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Gm7572-201ENSMUST00000182616 766 ntBASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Ighv1-86-201ENSMUST00000200562 353 ntBASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Gm43463-201ENSMUST00000195967 1803 ntBASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trpm1Q2TV84 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm11380-201ENSMUST00000118067 560 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm38007-201ENSMUST00000192187 313 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm6677-201ENSMUST00000195100 441 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm42867-201ENSMUST00000202995 469 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm37160-201ENSMUST00000193081 1689 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm25288-201ENSMUST00000122800 265 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm5808-201ENSMUST00000178090 357 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm7928-201ENSMUST00000181249 701 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm8226-201ENSMUST00000190511 798 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm43726-201ENSMUST00000199110 775 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm43811-201ENSMUST00000202862 695 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 AC154477.1-201ENSMUST00000226515 773 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 AC137842.2-201ENSMUST00000227734 797 ntBASIC16.3■□□□□ 0.2
Trpm1Q2TV84 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trpm1Q2TV84 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm1Q2TV84 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm1Q2TV84 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.29■□□□□ 0.2
Trpm1Q2TV84 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trpm1Q2TV84 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trpm1Q2TV84 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trpm1Q2TV84 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm1Q2TV84 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC16.29■□□□□ 0.2
Trpm1Q2TV84 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trpm1Q2TV84 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms