Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm6008-201ENSMUST00000206542 874 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm45437-202ENSMUST00000211418 694 ntTSL 3 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Cdca8-201ENSMUST00000030690 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 AC115891.2-201ENSMUST00000218448 1341 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm18227-201ENSMUST00000211082 1468 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm29487-201ENSMUST00000190146 256 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 AC125374.1-201ENSMUST00000213573 1400 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 AC125019.1-201ENSMUST00000224809 908 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Tmem29-201ENSMUST00000059256 1402 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm6713-201ENSMUST00000216137 1446 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm11882-201ENSMUST00000121463 506 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm12338-201ENSMUST00000122170 192 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gnb2-214ENSMUST00000168746 802 ntTSL 5 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm43833-201ENSMUST00000198828 293 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm38089-201ENSMUST00000193585 1514 ntBASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ush2AQ2QI47 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Ssr3-202ENSMUST00000119896 1469 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Scgb1b21-201ENSMUST00000170232 268 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Mir6354-201ENSMUST00000184979 116 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 CT025618.1-203ENSMUST00000227008 589 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 AC140406.3-201ENSMUST00000227619 478 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gm26035-201ENSMUST00000083065 308 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 AC153566.1-201ENSMUST00000216441 2057 ntBASIC5.98□□□□□ -1.45
Ush2AQ2QI47 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Srsf5-203ENSMUST00000110352 1491 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ush2AQ2QI47 Srsf5-204ENSMUST00000110354 1489 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms