Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.79□□□□□ -0.84
Tff1Q08423 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.79□□□□□ -0.84
Tff1Q08423 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Tff1Q08423 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.78□□□□□ -0.84
Tff1Q08423 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.78□□□□□ -0.84
Tff1Q08423 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
Tff1Q08423 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Tff1Q08423 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.78□□□□□ -0.84
Tff1Q08423 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.78□□□□□ -0.84
Tff1Q08423 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.78□□□□□ -0.84
Tff1Q08423 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.78□□□□□ -0.84
Tff1Q08423 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Tff1Q08423 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Gm23270-201ENSMUST00000104055 131 ntBASIC9.78□□□□□ -0.84
Tff1Q08423 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.78□□□□□ -0.84
Tff1Q08423 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.78□□□□□ -0.84
Tff1Q08423 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.78□□□□□ -0.84
Tff1Q08423 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Tff1Q08423 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC9.78□□□□□ -0.84
Tff1Q08423 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.78□□□□□ -0.84
Tff1Q08423 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.78□□□□□ -0.84
Tff1Q08423 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.78□□□□□ -0.84
Tff1Q08423 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Tff1Q08423 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.78□□□□□ -0.84
Tff1Q08423 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Tff1Q08423 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Tff1Q08423 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tff1Q08423 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tff1Q08423 Gm43321-201ENSMUST00000198897 2409 ntBASIC9.77□□□□□ -0.84
Tff1Q08423 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Tff1Q08423 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.77□□□□□ -0.84
Tff1Q08423 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Tff1Q08423 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.77□□□□□ -0.84
Tff1Q08423 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tff1Q08423 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tff1Q08423 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tff1Q08423 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Tff1Q08423 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Tff1Q08423 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Tff1Q08423 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Tff1Q08423 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Gm23912-201ENSMUST00000104687 87 ntBASIC9.77□□□□□ -0.85
Tff1Q08423 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Gm7857-201ENSMUST00000117957 358 ntBASIC9.77□□□□□ -0.85
Tff1Q08423 Gm11331-201ENSMUST00000119764 288 ntBASIC9.77□□□□□ -0.85
Tff1Q08423 Gm13665-201ENSMUST00000120830 528 ntBASIC9.77□□□□□ -0.85
Tff1Q08423 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC9.77□□□□□ -0.85
Tff1Q08423 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC9.77□□□□□ -0.85
Tff1Q08423 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Gm24845-201ENSMUST00000158034 109 ntBASIC9.77□□□□□ -0.85
Tff1Q08423 Rprl1-201ENSMUST00000158050 327 ntBASIC9.77□□□□□ -0.85
Tff1Q08423 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.77□□□□□ -0.85
Tff1Q08423 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Tff1Q08423 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 Gm28882-201ENSMUST00000185504 314 ntBASIC9.77□□□□□ -0.85
Tff1Q08423 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Tff1Q08423 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms