Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Col9a2Q07643 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.71□□□□□ -0.37
Col9a2Q07643 Gm15374-201ENSMUST00000119313 844 ntBASIC12.71□□□□□ -0.37
Col9a2Q07643 Gm11244-201ENSMUST00000121243 237 ntBASIC12.71□□□□□ -0.37
Col9a2Q07643 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.71□□□□□ -0.37
Col9a2Q07643 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col9a2Q07643 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col9a2Q07643 Gm10807-201ENSMUST00000177134 795 ntBASIC12.71□□□□□ -0.37
Col9a2Q07643 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Col9a2Q07643 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col9a2Q07643 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.71□□□□□ -0.37
Col9a2Q07643 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.71□□□□□ -0.37
Col9a2Q07643 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.71□□□□□ -0.37
Col9a2Q07643 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Col9a2Q07643 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col9a2Q07643 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col9a2Q07643 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.71□□□□□ -0.37
Col9a2Q07643 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col9a2Q07643 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Col9a2Q07643 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col9a2Q07643 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col9a2Q07643 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col9a2Q07643 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.71□□□□□ -0.38
Col9a2Q07643 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col9a2Q07643 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.71□□□□□ -0.38
Col9a2Q07643 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Col9a2Q07643 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Col9a2Q07643 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col9a2Q07643 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.71□□□□□ -0.38
Col9a2Q07643 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Gm37826-201ENSMUST00000195329 322 ntBASIC12.7□□□□□ -0.38
Col9a2Q07643 Gm42779-201ENSMUST00000198807 406 ntBASIC12.7□□□□□ -0.38
Col9a2Q07643 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.7□□□□□ -0.38
Col9a2Q07643 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.7□□□□□ -0.38
Col9a2Q07643 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Gm4978-201ENSMUST00000071565 801 ntBASIC12.7□□□□□ -0.38
Col9a2Q07643 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col9a2Q07643 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.7□□□□□ -0.38
Col9a2Q07643 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.7□□□□□ -0.38
Col9a2Q07643 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Gm15329-201ENSMUST00000121408 155 ntBASIC12.69□□□□□ -0.38
Col9a2Q07643 Gm15549-201ENSMUST00000121595 622 ntBASIC12.69□□□□□ -0.38
Col9a2Q07643 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.69□□□□□ -0.38
Col9a2Q07643 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col9a2Q07643 Gm8531-201ENSMUST00000188319 893 ntBASIC12.69□□□□□ -0.38
Col9a2Q07643 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.69□□□□□ -0.38
Col9a2Q07643 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.69□□□□□ -0.38
Col9a2Q07643 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.69□□□□□ -0.38
Col9a2Q07643 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.69□□□□□ -0.38
Col9a2Q07643 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.69□□□□□ -0.38
Col9a2Q07643 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.69□□□□□ -0.38
Col9a2Q07643 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms