Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.59□□□□□ -0.39
VcpQ01853 Gm19994-201ENSMUST00000217086 586 ntBASIC12.59□□□□□ -0.39
VcpQ01853 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
VcpQ01853 Gm21811-201ENSMUST00000096485 930 ntBASIC12.59□□□□□ -0.39
VcpQ01853 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.59□□□□□ -0.39
VcpQ01853 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.59□□□□□ -0.39
VcpQ01853 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VcpQ01853 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
VcpQ01853 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.58□□□□□ -0.39
VcpQ01853 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
VcpQ01853 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
VcpQ01853 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VcpQ01853 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.58□□□□□ -0.4
VcpQ01853 Gm7851-201ENSMUST00000117574 323 ntBASIC12.58□□□□□ -0.4
VcpQ01853 Gm15573-201ENSMUST00000119487 540 ntBASIC12.58□□□□□ -0.4
VcpQ01853 Mir1901-201ENSMUST00000122616 78 ntBASIC12.58□□□□□ -0.4
VcpQ01853 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.58□□□□□ -0.4
VcpQ01853 Gm23218-201ENSMUST00000158124 276 ntBASIC12.58□□□□□ -0.4
VcpQ01853 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.58□□□□□ -0.4
VcpQ01853 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.58□□□□□ -0.4
VcpQ01853 Gm9230-201ENSMUST00000188228 532 ntBASIC12.58□□□□□ -0.4
VcpQ01853 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.58□□□□□ -0.4
VcpQ01853 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.58□□□□□ -0.4
VcpQ01853 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.58□□□□□ -0.4
VcpQ01853 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.58□□□□□ -0.4
VcpQ01853 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VcpQ01853 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VcpQ01853 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.58□□□□□ -0.4
VcpQ01853 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.58□□□□□ -0.4
VcpQ01853 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VcpQ01853 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VcpQ01853 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.57□□□□□ -0.4
VcpQ01853 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.57□□□□□ -0.4
VcpQ01853 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
VcpQ01853 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
VcpQ01853 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.57□□□□□ -0.4
VcpQ01853 Gm11989-201ENSMUST00000117240 672 ntBASIC12.57□□□□□ -0.4
VcpQ01853 Gm11362-201ENSMUST00000118838 850 ntBASIC12.57□□□□□ -0.4
VcpQ01853 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
VcpQ01853 Gm25545-201ENSMUST00000122673 323 ntBASIC12.57□□□□□ -0.4
VcpQ01853 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Mir6998-201ENSMUST00000183343 64 ntBASIC12.57□□□□□ -0.4
VcpQ01853 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
VcpQ01853 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
VcpQ01853 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
VcpQ01853 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.57□□□□□ -0.4
VcpQ01853 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
VcpQ01853 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms