Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Col1a2Q01149 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.61□□□□□ -0.07
Col1a2Q01149 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Col1a2Q01149 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Col1a2Q01149 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Col1a2Q01149 Gm14740-201ENSMUST00000118538 1150 ntBASIC14.61□□□□□ -0.07
Col1a2Q01149 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC14.61□□□□□ -0.07
Col1a2Q01149 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC14.61□□□□□ -0.07
Col1a2Q01149 Gm17709-201ENSMUST00000174536 1096 ntBASIC14.61□□□□□ -0.07
Col1a2Q01149 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Col1a2Q01149 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.61□□□□□ -0.07
Col1a2Q01149 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC14.61□□□□□ -0.07
Col1a2Q01149 CT030170.2-201ENSMUST00000223267 126 ntBASIC14.61□□□□□ -0.07
Col1a2Q01149 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.61□□□□□ -0.07
Col1a2Q01149 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.61□□□□□ -0.07
Col1a2Q01149 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Col1a2Q01149 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Gm37122-201ENSMUST00000195313 1567 ntBASIC14.61□□□□□ -0.07
Col1a2Q01149 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.61□□□□□ -0.07
Col1a2Q01149 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.61□□□□□ -0.07
Col1a2Q01149 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Col1a2Q01149 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Col1a2Q01149 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm12030-201ENSMUST00000121917 223 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm22442-201ENSMUST00000157256 144 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm29067-201ENSMUST00000190821 470 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm3017-201ENSMUST00000203603 1126 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm44008-201ENSMUST00000204345 412 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm39288-201ENSMUST00000210554 446 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm6653-201ENSMUST00000218063 1288 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 AC122891.1-201ENSMUST00000218671 268 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm19046-201ENSMUST00000221263 1298 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 AC165154.1-201ENSMUST00000226661 340 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm9415-201ENSMUST00000200462 1321 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Mir7051-201ENSMUST00000184167 73 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm8436-201ENSMUST00000210152 1080 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm5749-201ENSMUST00000210673 1090 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm3028-201ENSMUST00000213805 1119 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Gm9139-201ENSMUST00000218817 700 ntBASIC14.6□□□□□ -0.07
Col1a2Q01149 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Col1a2Q01149 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Col1a2Q01149 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Col1a2Q01149 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Col1a2Q01149 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.59□□□□□ -0.07
Col1a2Q01149 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms